pmdk-regression.qsub 1.59 KB
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#!/bin/bash
#COBALT -n 1
#COBALT -t 20
#COBALT --mode script
#COBALT -A radix-io
#COBALT -q debug-cache-quad

# XXX xalt module currently eating '-M' flag for mercury-runner...disabling for now
# module unload xalt

# necessary when using the udreg option in Mercury
export MPICH_GNI_NDREG_ENTRIES=1024

module swap PrgEnv-intel PrgEnv-gnu
module load cce

. $SANDBOX/spack/share/spack/setup-env.sh
spack load -r ssg 
spack load -r bake

module list

# NOTE: rpath doesn't seem to be set correctly, and the paths we need are 
#  in LIBRARY_PATH instead of LD_LIBRARY_PATH
export LD_LIBRARY_PATH=$LIBRARY_PATH

# find nodes in job.  We have to do this so that we can manually specify 
# in each aprun so that server ranks consitently run on node where we
# set up storage space
declare -a nodes=($(python /home/carns/bin/run_on_all_nids.py));

echo "## PMDK (8x concurrency):"
aprun -n 1 -N 1 -L ${nodes[0]} hostname
aprun -n 1 -N 1 -L ${nodes[0]} rm -f /dev/shm/foo.dat
aprun -n 1 -N 1 -L ${nodes[0]} truncate -s 60G /dev/shm/foo.dat
aprun -n 1 -N 1 -L ${nodes[0]} pmempool create obj /dev/shm/foo.dat
aprun -n 1 -N 1 -L ${nodes[0]} ls -alh /dev/shm/foo.dat
aprun -n 1 -N 1 -L ${nodes[0]} ./pmdk-bw -x 16777216 -m 34359738368 -c 8 

echo "## PMDK (8x concurrency, 8 es):"
aprun -n 1 -N 1 -L ${nodes[0]} hostname
aprun -n 1 -N 1 -L ${nodes[0]} rm -f /dev/shm/foo.dat
aprun -n 1 -N 1 -L ${nodes[0]} truncate -s 60G /dev/shm/foo.dat
aprun -n 1 -N 1 -L ${nodes[0]} pmempool create obj /dev/shm/foo.dat
aprun -n 1 -N 1 -L ${nodes[0]} ls -alh /dev/shm/foo.dat
aprun -n 1 -N 1 -L ${nodes[0]} ./pmdk-bw -x 16777216 -m 34359738368 -c 8 -T 8