Fixes #1962

Signed-off-by: Junchao Zhang<jczhang@mcs.anl.gov> (Reviewed by Bill Gropp)

Signed-off-by: Junchao Zhang<jczhang@mcs.anl.gov> (Reviewed by Bill Gropp)

With the macro, we can get pointers on counter/timer pvars.

Signed-off-by: Junchao Zhang<jczhang@mcs.anl.gov> (Reviewed by Bill Gropp)

To record how many times a timer is started, so we can easily
calculate the average time of events.

Signed-off-by: Junchao Zhang<jczhang@mcs.anl.gov> (Reviewed by Bill Gropp)

Removed the gate surrounding this macro.

Signed-off-by: Junchao Zhang<jczhang@mcs.anl.gov> (Reviewed by Bill Gropp)

The return value of the callbacks is of less value.

Signed-off-by: Junchao Zhang<jczhang@mcs.anl.gov> (Reviewed by Bill Gropp)

Make the default of --enable-mpit-pvars= be 'none' instead of 'all'

Signed-off-by: Junchao Zhang<jczhang@mcs.anl.gov> (Reviewed by Bill Gropp)

Also deleted instr option in configure.ac

Signed-off-by: Junchao Zhang<jczhang@mcs.anl.gov> (Reviewed by Bill Gropp)

Fixes #1883

Reviewed-by: Michael Blocksome <blocksom@us.ibm.com>

Use the string format macro for MPI_Aint

Signed-off-by: Rob Latham <robl@mcs.anl.gov>

Dave Goodell reported a situation where ROMIO would retry "forever" and
suggested we give up after a large number of retries.

Signed-off-by: "Dave Goodell (dgoodell)" <dgoodell@cisco.com>

Rob Latham authored Dec 09, 2013 and Kenneth Raffenetti committed Dec 10, 2013

const-ificaiton of MPI routines happened only in MPI-3.  making ROMIO's
const-ification optional lets us work standalone with older libraries.

Signed-off-by: Ken Raffenetti <raffenet@mcs.anl.gov>

Rob Latham authored Dec 09, 2013 and Kenneth Raffenetti committed Dec 09, 2013

the HINDEXED_BLOCK combiner did not exist in older MPI implementations

Signed-off-by: Ken Raffenetti <raffenet@mcs.anl.gov>

Rob Latham authored Dec 09, 2013 and Kenneth Raffenetti committed Dec 09, 2013

the bluegene drivers can rely on MPIX routines (declared in mpix.h)
instead of device-internal routines (e.g. MPIX_Hardware() )

Signed-off-by: Ken Raffenetti <raffenet@mcs.anl.gov>

Rob Latham authored Dec 09, 2013 and Kenneth Raffenetti committed Dec 09, 2013

older MPI implementations may not have MPI_Count.  MPI_Aint is an ok
substitute.

Signed-off-by: Ken Raffenetti <raffenet@mcs.anl.gov>

Masamichi Takagi authored Dec 07, 2013 and Pavan Balaji committed Dec 08, 2013

Add lines to README.vin on how to configure the DCFA network module
which makes MPICH run on IB and Xeon Phi.

Signed-off-by: Pavan Balaji <balaji@mcs.anl.gov>

No reviewer.

Kenneth Raffenetti authored Dec 06, 2013 and Pavan Balaji committed Dec 07, 2013

Signed-off-by: Pavan Balaji <balaji@mcs.anl.gov>

Picked up the relevant parts of [a460c1ee

].

Signed-off-by: Ken Raffenetti <raffenet@mcs.anl.gov>

Signed-off-by: Ken Raffenetti <raffenet@mcs.anl.gov>

Cast the pointer to the correct type so that
it works on big-endian systems

Signed-off-by: Michael Blocksome <blocksom@us.ibm.com>
Signed-off-by: Junchao Zhang <jczhang@mcs.anl.gov>

- the XOPEN_SOURCE definition seems to be uneeded.  It was there from
  the early days, probably defensively, but it messes up the declaration
  of caddr_t needed by quota.h which in turn is recently needed by
  lustre.

- the reworked hint functions for lustre did not compile.  oops.

Closes #1973

Masamichi Takagi authored Dec 04, 2013 and Pavan Balaji committed Dec 05, 2013

Add PAC_SET_HEADER_LIB_PATH(dcfa) in
src/mpid/ch3/channels/nemesis/subconfigure.m4
so that --with-dcfa, --with-dcfa-lib and --with-dcfa-include
is enabled.

Signed-off-by: Pavan Balaji <balaji@mcs.anl.gov>

Masamichi Takagi authored Dec 04, 2013 and Pavan Balaji committed Dec 05, 2013

Signed-off-by: Pavan Balaji <balaji@mcs.anl.gov>

(ibm) D192063: MPI_Alltoall issue with non-contig datatypes and colsel
(ibm) 14981425fb8db5ee7aab152ddbb5e92d8a477e1d

Signed-off-by: Michael Blocksome <blocksom@us.ibm.com>

(ibm) Disabling PAMI if Collective selection can't be enabled
(ibm) 19a99aa5b81cb5a99a0284830a7caa2bd9f0c923

Signed-off-by: Michael Blocksome <blocksom@us.ibm.com>

(ibm) D189408
(ibm) b58293f8c851895ac7d3c8f3220dee196b6ad075

Signed-off-by: Michael Blocksome <blocksom@us.ibm.com>

Give a little more breathing room for our OSX slaves. This test is
still timing out in some instances.

Signed-off-by: Wesley Bland <wbland@mcs.anl.gov>

Uses macro from [1638ed88

]

Signed-off-by: Wesley Bland <wbland@mcs.anl.gov>

closes ticket #1958

(ibm) D189947

Signed-off-by: Haizhu Liu <haizhu@us.ibm.com>

Flag an error and exit when dynamic tasking APIs are called on
jobs that are not launched in dynamic mode in PE.

closes ticket #1961

(ibm) D192324

Signed-off-by: Michael Blocksome <blocksom@us.ibm.com>

Fixes a crash in finalize when --enable-debuginfo is set

(ibm) D193788

Signed-off-by: Michael Blocksome <blocksom@us.ibm.com>

(ibm) D192947

Signed-off-by: Michael Blocksome <blocksom@us.ibm.com>

  MPI Standard states:
  MPI_PROC_NULL is a valid target rank in all MPI RMA communication calls. The effect
  is the same as for MPI_PROC_NULL in MPI point-to-point communication. After any RMA
  operation with rank MPI_PROC_NULL, it is still necessary to finish the RMA epoch with the
  synchronization method that started the epoch.

  In the current design, both MPI_Win_lock and MPI_Win_unlock do not comply with the standard, e.g.
  if MPI_PROC_NULL is passed in as the target_rank of MPI_Win_lock or MPI_Win_unlock, without the
  fix, the job will be terminated with segfault.

  (ibm) D194295

Signed-off-by: Michael Blocksome <blocksom@us.ibm.com>

The following functions are added:
- MPI_Win_allocate
- MPI_Win_allocate_dynamic
- MPI_Win_attach
- MPI_Win_deatch
- MPI_Win_lock_all
- MPI_Win_unlock_all
- MPI_Win_sync
- MPI_Win_flush

(ibm) F189033

Signed-off-by: Michael Blocksome <blocksom@us.ibm.com>

The following changes apply only to the PAMId layer
 - provided MPID_Win_set_info and MPID_Win_get_info functions
 - redesigned the window creation.The change is to support new window creation
   functions introduced in MPI 3.0.
 - updated pscw, MPIDI_WinCtrlSend etc. to reflect the change made in
   MPI_Group_incl().

The following changes were made after a code review
 - added a comment for zero_req in mpidi_onesided.h
 - replaced "pami_task_t peer" "int rank"  in MPIDI_WinCtrlSen()

(ibm) F189041

Signed-off-by: Michael Blocksome <blocksom@us.ibm.com>

Wesley Bland authored Dec 03, 2013 and Kenneth Raffenetti committed Dec 04, 2013

Fixes #1897. This adds a simple man page for hydra_nameserver, hydra_persist,
and hydra_pmi_proxy. None of these man pages have any real information in them
as users shouldn't be using these executables directly.

Signed-off-by: Ken Raffenetti <raffenet@mcs.anl.gov>

Wesley Bland authored Dec 03, 2013 and Kenneth Raffenetti committed Dec 04, 2013

This adds the framework to add doctext docs to hydra. To add a .txt file, just
add it to the doc1_src_txt autogen variable.

Signed-off-by: Ken Raffenetti <raffenet@mcs.anl.gov>

Thanks to Masamichi Takagi @ NEC, Japan for reporting the error and
suggesting the patch.  The cached PUTs array was not reinitialized to
NULL values after the first time they were sent upstream and cleared.
So the next time we push them upstream, they contained garbage data
causing segfaults.  This patch looks for the number of arguments
rather than a NULL argument as a termination detector.

Signed-off-by: Masamichi Takagi <masamichi.takagi@gmail.com>