Xin Zhao authored Jun 12, 2015 and Pavan Balaji committed Jun 26, 2015

Originally we poke the progress engine at the end of RMA sync calls
if progress engine is never poked in this call before. The purpose
of this is to prevent possible deadlock problem. However, the deadlock
problem should only happen in self lock cases, if target is not myself,
it add unnecessary overhead to RMA sync calls. In this patch, we delete
those progress poking but only leave ones when target is myself.

Signed-off-by: Pavan Balaji <balaji@anl.gov>

Xin Zhao authored Jun 15, 2015 and Pavan Balaji committed Jun 26, 2015

In this patch, we add a reduce-scatter based algorithm in
MPI_Win_fence, which is triggered when number of processes
is at a small / medium value. When this algorithm is being
used, memory usage is O(P), but the ending FENCE only needs
to wait for local completion but does not need to wait for
remote completion. When number of processes is large, we
switch FENCE to the original barrier based algorithm, which
has O(1) memory usage, but needs to wait for the remote
completion in the ending FENCE.

Signed-off-by: Pavan Balaji <balaji@anl.gov>

Xin Zhao authored Jun 11, 2015 and Pavan Balaji committed Jun 26, 2015

Signed-off-by: Pavan Balaji <balaji@anl.gov>

Xin Zhao authored Jun 15, 2015 and Pavan Balaji committed Jun 26, 2015

Signed-off-by: Pavan Balaji <balaji@anl.gov>

Xin Zhao authored Jun 21, 2015 and Pavan Balaji committed Jun 26, 2015

On target side, after we receive the GACC/FOP packet, we should
first start sending back the data, then perform ACC computation.
By doing this issuing data and computation can be overlapped.

Signed-off-by: Pavan Balaji <balaji@anl.gov>

Xin Zhao authored Jun 21, 2015 and Pavan Balaji committed Jun 26, 2015

This optimization was missed in 7189bcde

.
Here we add this back so that when there is no iSSUED active win
or passive win, we ignore the while loop in RMA progress.

Signed-off-by: Pavan Balaji <balaji@anl.gov>

Xin Zhao authored Jun 24, 2015 and Pavan Balaji committed Jun 26, 2015

Originally the arguments passed to MPI_Win_create in this test
was wrong. This patch fixed this issue.

Signed-off-by: Pavan Balaji <balaji@anl.gov>

Signed-off-by: Halim Amer <aamer@anl.gov>

Signed-off-by: Halim Amer <aamer@anl.gov>

In the Nemesis implementation of Win_gather_info(), we allocate
a memory region on SHM to store window information for other
processes, so that all processes on the same node can share
those information. However, previously the memory size was
incorrectly set as O(node_comm_size), which should be O(comm_size).
This patch fixed this bug.

Signed-off-by: Min Si <msi@il.is.s.u-tokyo.ac.jp>
Signed-off-by: Pavan Balaji <balaji@anl.gov>

The original implementation in Win_flush_local counts number
of total local completion and remote completion needed to
wait, and then waiting for current local/remote completion
count to reach those values. There is a bug that we should
initialize the current count to zero in each while loop,
otherwise the targets that are already completed will be
count again and we failed to wait for some targets to be
completed. This patch fixes this issue.

Signed-off-by: Pavan Balaji <balaji@anl.gov>

Xin Zhao authored Jun 23, 2015 and Pavan Balaji committed Jun 24, 2015

No reviewer.

Signed-off-by: Pavan Balaji <balaji@anl.gov>

Signed-off-by: Junchao Zhang <jczhang@mcs.anl.gov>

No Reviewer

No reviewer

Lisandro Dalcin <dalcinl@gmail.com> reports that mpi4py's test suite
invokes MPIR_Add_finalize() 33 times.  It's been 6.5 years since we
doubled it, so bump it up once again.

Closes: #2272
Signed-off-by: Junchao Zhang <jczhang@mcs.anl.gov>

disable this memory-intensive test on 32 bit platforms

No Reviewer

resize and struct are the two type constructors that can set the LB and
UB markers on a type.  Struct, due to MPI-1 ideas, is a strange beast
(they adjust only if they are lower/higher than the old ones (!) )
but for resized it's clear that the markers shift.

Closes #2088

Signed-off-by: Pavan Balaji <balaji@anl.gov>

in deep types we might want to update the lb and ub, not simply
append/prepend two tuples to the flattened representation.

Signed-off-by: Pavan Balaji <balaji@anl.gov>

some libraries like HDF5 want to register their cleanup routines into
finalize.  these cleanup routines use MPI-IO, so they need to fire
before ROMIO cleans up.

Signed-off-by: Pavan Balaji <balaji@anl.gov>

Signed-off-by: Min Si <msi@il.is.s.u-tokyo.ac.jp>
Signed-off-by: Rob Latham <robl@mcs.anl.gov>

Xin Zhao authored Jun 23, 2015 and Sangmin Seo committed Jun 23, 2015

Signed-off-by: Sangmin Seo <sseo@anl.gov>

Xin Zhao authored Jun 23, 2015 and Sangmin Seo committed Jun 23, 2015

Signed-off-by: Sangmin Seo <sseo@anl.gov>

type promotions have resulted in a change to the device layer.

Ref: 1767
Signed-off-by: Pavan Balaji <balaji@anl.gov>
Signed-off-by: Sameh S Sharkawi <sssharka@us.ibm.com>

despite promoting types throughout the gather path, still had one case of
constructing structs with larger-than-int blocklens.  solution: borrow BigMPI
strategy and construct types-of-chunks to get around limitations.

Ref: #1767
Signed-off-by: Pavan Balaji <balaji@anl.gov>

The ongoing march towards 64-bit clean continues.  Address areas where large
product of two ints might have overflowed.

Ref: #1767
Signed-off-by: Pavan Balaji <balaji@anl.gov>

- preprocessor constants need parens
- which showed the "always fail" case wasn't big enough
- compiler warned about variables possibly being used uninitialized

Ref: #1767
Signed-off-by: Pavan Balaji <balaji@anl.gov>

Junchao Zhang authored Jun 19, 2015 and Pavan Balaji committed Jun 20, 2015

Signed-off-by: Pavan Balaji <balaji@anl.gov>

Junchao Zhang authored Jun 17, 2015 and Pavan Balaji committed Jun 20, 2015

Signed-off-by: Pavan Balaji <balaji@anl.gov>

Junchao Zhang authored Jun 16, 2015 and Pavan Balaji committed Jun 20, 2015

Signed-off-by: Pavan Balaji <balaji@anl.gov>

No reviewer.

commit 83253a41

 triggerd a bunch of new warnings.  Take a different
approach.  For simplicity of implementation, do_accumulate_op is defined
as MPI_User_function.  We could split up internal routine and
user-provided routines, but that complicates the code for little
benefit:

Instead, keep do_accumlate_op with an int type, but check for overflow
before explicitly casting.  In many places the count is simply '1'.  In
stream processing there is an interal limit of 256k, so the assertion
should never fire.

Signed-off-by: Xin Zhao <xinzhao3@illinois.edu>

Encode request handles in unused tag bits, eliminating the need
for hash table.

Signed-off-by: Antonio Pena Monferrer <apenya@mcs.anl.gov>

rma/manyget was failing because we reached the maximum number of MEs
allowed: we were posting an ME for every remote get. This patch
implements a single persistent ME instead for the remote gets.

Fixes #2264

Signed-off-by: Ken Raffenetti <raffenet@mcs.anl.gov>

Signed-off-by: Antonio J. Pena <apenya@mcs.anl.gov>

MPID_Segment_pack/unpack should be all we need to manipulate noncontig
messages. Not sure why these were originally included.

Signed-off-by: Antonio J. Pena <apenya@mcs.anl.gov>

Because we don't drain the EQs in the event of flow control, we need
to use a dedicated EQ for messages related to pausing and unpausing
communication. These messages are all consumed by the Rportals layer,
the user will never see anything.

Signed-off-by: Antonio J. Pena <apenya@mcs.anl.gov>

Signed-off-by: Xin Zhao <xinzhao3@illinois.edu>

Lena Oden authored Jun 12, 2015 and Kenneth Raffenetti committed Jun 16, 2015

Loser of Head-to-Head connections are not necessarily
closed, if the sock set is destroyed. This patch
looks for all open connections, close the socket
and free the memory recourses. Fixes #2180

Signed-off-by: Ken Raffenetti <raffenet@mcs.anl.gov>