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Michael Buehlmann
GenericIO
Commits
9ee2ce3c
Commit
9ee2ce3c
authored
Sep 28, 2018
by
Hal Finkel
Browse files
importing new SZ files
parent
abca1570
Changes
56
Expand all
Hide whitespace changes
Inline
Side-by-side
thirdparty/SZ/COPYRIGHT.txt
View file @
9ee2ce3c
Copyright © 2016 , UChicago Argonne, LLC
All Rights Reserved
[SZ, Version 1.
3
]
[SZ, Version 1.
4
]
Sheng Di
Dingwen Tao
Xin Liang
Franck Cappello
Argonne National Laboratory
...
...
thirdparty/SZ/sz/include/TightDataPointStorageD.h
View file @
9ee2ce3c
...
...
@@ -23,6 +23,8 @@ typedef struct TightDataPointStorageD
char
reqLength
;
char
radExpo
;
//used to compute reqLength based on segmented precisions in "pw_rel_compression"
double
minLogValue
;
int
stateNum
;
int
allNodes
;
...
...
@@ -52,6 +54,10 @@ typedef struct TightDataPointStorageD
unsigned
char
*
pwrErrBoundBytes
;
int
pwrErrBoundBytes_size
;
unsigned
char
*
raBytes
;
size_t
raBytes_size
;
}
TightDataPointStorageD
;
void
new_TightDataPointStorageD_Empty
(
TightDataPointStorageD
**
self
);
...
...
thirdparty/SZ/sz/include/TightDataPointStorageF.h
View file @
9ee2ce3c
...
...
@@ -34,6 +34,8 @@ typedef struct TightDataPointStorageF
unsigned
char
*
rtypeArray
;
size_t
rtypeArray_size
;
float
minLogValue
;
unsigned
char
*
typeArray
;
//its size is dataSeriesLength/4 (or xxx/4+1)
size_t
typeArray_size
;
...
...
@@ -55,6 +57,9 @@ typedef struct TightDataPointStorageF
unsigned
char
*
pwrErrBoundBytes
;
int
pwrErrBoundBytes_size
;
unsigned
char
*
raBytes
;
size_t
raBytes_size
;
}
TightDataPointStorageF
;
void
new_TightDataPointStorageF_Empty
(
TightDataPointStorageF
**
self
);
...
...
thirdparty/SZ/sz/include/TypeManager.h
View file @
9ee2ce3c
...
...
@@ -19,8 +19,10 @@ extern "C" {
//TypeManager.c
size_t
convertIntArray2ByteArray_fast_1b
(
unsigned
char
*
intArray
,
size_t
intArrayLength
,
unsigned
char
**
result
);
size_t
convertIntArray2ByteArray_fast_1b_to_result
(
unsigned
char
*
intArray
,
size_t
intArrayLength
,
unsigned
char
*
result
);
void
convertByteArray2IntArray_fast_1b
(
size_t
intArrayLength
,
unsigned
char
*
byteArray
,
size_t
byteArrayLength
,
unsigned
char
**
intArray
);
size_t
convertIntArray2ByteArray_fast_2b
(
unsigned
char
*
timeStepType
,
size_t
timeStepTypeLength
,
unsigned
char
**
result
);
size_t
convertIntArray2ByteArray_fast_2b_inplace
(
unsigned
char
*
timeStepType
,
size_t
timeStepTypeLength
,
unsigned
char
*
result
);
void
convertByteArray2IntArray_fast_2b
(
size_t
stepLength
,
unsigned
char
*
byteArray
,
size_t
byteArrayLength
,
unsigned
char
**
intArray
);
size_t
convertIntArray2ByteArray_fast_3b
(
unsigned
char
*
timeStepType
,
size_t
timeStepTypeLength
,
unsigned
char
**
result
);
void
convertByteArray2IntArray_fast_3b
(
size_t
stepLength
,
unsigned
char
*
byteArray
,
size_t
byteArrayLength
,
unsigned
char
**
intArray
);
...
...
thirdparty/SZ/sz/include/callZlib.h
View file @
9ee2ce3c
...
...
@@ -19,6 +19,8 @@ extern "C" {
#include
<stdio.h>
int
isZlibFormat
(
unsigned
char
magic1
,
unsigned
char
magic2
);
//callZlib.c
unsigned
long
zlib_compress
(
unsigned
char
*
data
,
unsigned
long
dataLength
,
unsigned
char
**
compressBytes
,
int
level
);
unsigned
long
zlib_compress2
(
unsigned
char
*
data
,
unsigned
long
dataLength
,
unsigned
char
**
compressBytes
,
int
level
);
...
...
thirdparty/SZ/sz/include/dataCompression.h
View file @
9ee2ce3c
...
...
@@ -77,6 +77,18 @@ int computeBlockEdgeSize_3D(int segmentSize);
int
computeBlockEdgeSize_2D
(
int
segmentSize
);
int
initRandomAccessBytes
(
unsigned
char
*
raBytes
);
int
generateLossyCoefficients_float
(
float
*
oriData
,
double
precision
,
size_t
nbEle
,
int
*
reqBytesLength
,
int
*
resiBitsLength
,
float
*
medianValue
,
float
*
decData
);
int
compressExactDataArray_float
(
float
*
oriData
,
double
precision
,
size_t
nbEle
,
unsigned
char
**
leadArray
,
unsigned
char
**
midArray
,
unsigned
char
**
resiArray
,
int
reqLength
,
int
reqBytesLength
,
int
resiBitsLength
,
float
medianValue
);
void
decompressExactDataArray_float
(
unsigned
char
*
leadNum
,
unsigned
char
*
exactMidBytes
,
unsigned
char
*
residualMidBits
,
size_t
nbEle
,
int
reqLength
,
float
medianValue
,
float
**
decData
);
int
generateLossyCoefficients_double
(
double
*
oriData
,
double
precision
,
size_t
nbEle
,
int
*
reqBytesLength
,
int
*
resiBitsLength
,
double
*
medianValue
,
double
*
decData
);
int
compressExactDataArray_double
(
double
*
oriData
,
double
precision
,
size_t
nbEle
,
unsigned
char
**
leadArray
,
unsigned
char
**
midArray
,
unsigned
char
**
resiArray
,
int
reqLength
,
int
reqBytesLength
,
int
resiBitsLength
,
double
medianValue
);
void
decompressExactDataArray_double
(
unsigned
char
*
leadNum
,
unsigned
char
*
exactMidBytes
,
unsigned
char
*
residualMidBits
,
size_t
nbEle
,
int
reqLength
,
double
medianValue
,
double
**
decData
);
#ifdef __cplusplus
}
#endif
...
...
thirdparty/SZ/sz/include/pastriD.h
View file @
9ee2ce3c
This diff is collapsed.
Click to expand it.
thirdparty/SZ/sz/include/pastriF.h
View file @
9ee2ce3c
This diff is collapsed.
Click to expand it.
thirdparty/SZ/sz/include/sz.h
View file @
9ee2ce3c
...
...
@@ -54,6 +54,7 @@
#include
"pastri.h"
#include
"sz_float_ts.h"
#include
"szd_float_ts.h"
#include
"utility.h"
#ifdef _WIN32
#define PATH_SEPARATOR ';'
...
...
@@ -74,11 +75,11 @@ extern "C" {
//typedef long int64_t;
//typedef unsigned long uint64_t;
#define SZ_VERNUM 0x0
14
0
#define SZ_VER_MAJOR
1
#define SZ_VER_MINOR
4
#define SZ_VER_BUILD
13
#define SZ_VER_REVISION
5
#define SZ_VERNUM 0x0
20
0
#define SZ_VER_MAJOR
2
#define SZ_VER_MINOR
0
#define SZ_VER_BUILD
2
#define SZ_VER_REVISION
0
#define PASTRI 103
#define HZ 102
...
...
@@ -130,6 +131,9 @@ extern "C" {
#define SZ_DEFAULT_COMPRESSION 2
#define SZ_TEMPORAL_COMPRESSION 3
#define SZ_NO_REGRESSION 0
#define SZ_WITH_LINEAR_REGRESSION 1
#define SZ_PWR_MIN_TYPE 0
#define SZ_PWR_AVG_TYPE 1
#define SZ_PWR_MAX_TYPE 2
...
...
@@ -151,6 +155,10 @@ extern "C" {
#define MetaDataByteLength 20
#define numOfBufferedSteps 1 //the number of time steps in the buffer
#define GZIP_COMPRESSOR 0 //i.e., ZLIB_COMPRSSOR
#define ZSTD_COMPRESSOR 1
//Note: the following setting should be consistent with stateNum in Huffman.h
//#define intvCapacity 65536
...
...
@@ -236,6 +244,7 @@ typedef struct sz_params
unsigned
int
quantization_intervals
;
unsigned
int
maxRangeRadius
;
int
sol_ID
;
// it's always SZ, unless the setting is PASTRI compression mode (./configure --enable-pastri)
int
losslessCompressor
;
int
sampleDistance
;
//2 bytes
float
predThreshold
;
// 2 bytes
int
szMode
;
//* 0 (best speed) or 1 (better compression with Gzip) or 3 temporal-dimension based compression
...
...
@@ -278,6 +287,10 @@ typedef struct sz_tsc_metainfo
int
currentStep
;
char
metadata_filename
[
256
];
FILE
*
metadata_file
;
unsigned
char
*
bit_array
;
//sihuan added
size_t
intersect_size
;
//sihuan added
int64_t
*
hist_index
;
//sihuan added: prestep index
}
sz_tsc_metadata
;
extern
int
versionNumber
[
4
];
...
...
@@ -289,6 +302,8 @@ extern int sysEndianType; //*sysEndianType is actually set automatically.
extern
sz_params
*
confparams_cpr
;
extern
sz_params
*
confparams_dec
;
extern
sz_exedata
*
exe_params
;
extern
int
sz_with_regression
;
//------------------------------------------------
extern
SZ_VarSet
*
sz_varset
;
extern
sz_multisteps
*
multisteps
;
//compression based on multiple time steps (time-dimension based compression)
...
...
@@ -356,8 +371,6 @@ void filloutDimArray(size_t* dim, size_t r5, size_t r4, size_t r3, size_t r2, si
size_t
compute_total_batch_size
();
int
isZlibFormat
(
unsigned
char
magic1
,
unsigned
char
magic2
);
void
SZ_registerVar
(
char
*
varName
,
int
dataType
,
void
*
data
,
int
errBoundMode
,
double
absErrBound
,
double
relBoundRatio
,
double
pwRelBoundRatio
,
size_t
r5
,
size_t
r4
,
size_t
r3
,
size_t
r2
,
size_t
r1
);
...
...
thirdparty/SZ/sz/include/sz_double.h
View file @
9ee2ce3c
...
...
@@ -75,6 +75,12 @@ size_t r1, size_t r2, size_t r3, size_t s1, size_t s2, size_t s3, size_t e1, siz
TightDataPointStorageD
*
SZ_compress_double_4D_MDQ_subblock
(
double
*
oriData
,
double
realPrecision
,
double
valueRangeSize
,
double
medianValue_d
,
size_t
r1
,
size_t
r2
,
size_t
r3
,
size_t
r4
,
size_t
s1
,
size_t
s2
,
size_t
s3
,
size_t
s4
,
size_t
e1
,
size_t
e2
,
size_t
e3
,
size_t
e4
);
unsigned
int
optimize_intervals_double_2D_with_freq_and_dense_pos
(
double
*
oriData
,
size_t
r1
,
size_t
r2
,
double
realPrecision
,
double
*
dense_pos
,
double
*
max_freq
,
double
*
mean_freq
);
unsigned
int
optimize_intervals_double_3D_with_freq_and_dense_pos
(
double
*
oriData
,
size_t
r1
,
size_t
r2
,
size_t
r3
,
double
realPrecision
,
double
*
dense_pos
,
double
*
max_freq
,
double
*
mean_freq
);
unsigned
char
*
SZ_compress_double_2D_MDQ_nonblocked_with_blocked_regression
(
double
*
oriData
,
size_t
r1
,
size_t
r2
,
double
realPrecision
,
size_t
*
comp_size
);
unsigned
char
*
SZ_compress_double_3D_MDQ_nonblocked_with_blocked_regression
(
double
*
oriData
,
size_t
r1
,
size_t
r2
,
size_t
r3
,
double
realPrecision
,
size_t
*
comp_size
);
#ifdef __cplusplus
}
#endif
...
...
thirdparty/SZ/sz/include/sz_double_pwr.h
View file @
9ee2ce3c
...
...
@@ -37,6 +37,10 @@ double absErrBound, double relBoundRatio, double pwrErrRatio, double valueRangeS
void
SZ_compress_args_double_NoCkRngeNoGzip_1D_pwrgroup
(
unsigned
char
**
newByteData
,
double
*
oriData
,
size_t
dataLength
,
double
absErrBound
,
double
relBoundRatio
,
double
pwrErrRatio
,
double
valueRangeSize
,
double
medianValue_f
,
size_t
*
outSize
);
void
SZ_compress_args_double_NoCkRngeNoGzip_1D_pwr_pre_log
(
unsigned
char
**
newByteData
,
double
*
oriData
,
double
globalPrecision
,
size_t
dataLength
,
size_t
*
outSize
,
double
min
,
double
max
);
void
SZ_compress_args_double_NoCkRngeNoGzip_2D_pwr_pre_log
(
unsigned
char
**
newByteData
,
double
*
oriData
,
double
globalPrecision
,
size_t
r1
,
size_t
r2
,
size_t
*
outSize
,
double
min
,
double
max
);
void
SZ_compress_args_double_NoCkRngeNoGzip_3D_pwr_pre_log
(
unsigned
char
**
newByteData
,
double
*
oriData
,
double
globalPrecision
,
size_t
r1
,
size_t
r2
,
size_t
r3
,
size_t
*
outSize
,
double
min
,
double
max
);
#ifdef __cplusplus
}
#endif
...
...
thirdparty/SZ/sz/include/sz_float.h
View file @
9ee2ce3c
...
...
@@ -128,6 +128,14 @@ size_t r1, size_t r2, size_t r3, size_t s1, size_t s2, size_t s3, size_t e1, siz
TightDataPointStorageF
*
SZ_compress_float_4D_MDQ_subblock
(
float
*
oriData
,
double
realPrecision
,
float
valueRangeSize
,
float
medianValue_f
,
size_t
r1
,
size_t
r2
,
size_t
r3
,
size_t
r4
,
size_t
s1
,
size_t
s2
,
size_t
s3
,
size_t
s4
,
size_t
e1
,
size_t
e2
,
size_t
e3
,
size_t
e4
);
unsigned
int
optimize_intervals_float_2D_with_freq_and_dense_pos
(
float
*
oriData
,
size_t
r1
,
size_t
r2
,
double
realPrecision
,
float
*
dense_pos
,
float
*
max_freq
,
float
*
mean_freq
);
unsigned
int
optimize_intervals_float_3D_with_freq_and_dense_pos
(
float
*
oriData
,
size_t
r1
,
size_t
r2
,
size_t
r3
,
double
realPrecision
,
float
*
dense_pos
,
float
*
max_freq
,
float
*
mean_freq
);
unsigned
char
*
SZ_compress_float_2D_MDQ_nonblocked_with_blocked_regression
(
float
*
oriData
,
size_t
r1
,
size_t
r2
,
double
realPrecision
,
size_t
*
comp_size
);
unsigned
char
*
SZ_compress_float_3D_MDQ_nonblocked_with_blocked_regression
(
float
*
oriData
,
size_t
r1
,
size_t
r2
,
size_t
r3
,
double
realPrecision
,
size_t
*
comp_size
);
unsigned
char
*
SZ_compress_float_3D_MDQ_random_access_with_blocked_regression
(
float
*
oriData
,
size_t
r1
,
size_t
r2
,
size_t
r3
,
double
realPrecision
,
size_t
*
comp_size
);
#ifdef __cplusplus
}
#endif
...
...
thirdparty/SZ/sz/include/sz_float_pwr.h
View file @
9ee2ce3c
...
...
@@ -44,6 +44,10 @@ double absErrBound, double relBoundRatio, double pwrErrRatio, float valueRangeSi
void
SZ_compress_args_float_NoCkRngeNoGzip_1D_pwrgroup
(
unsigned
char
**
newByteData
,
float
*
oriData
,
size_t
dataLength
,
double
absErrBound
,
double
relBoundRatio
,
double
pwrErrRatio
,
float
valueRangeSize
,
float
medianValue_f
,
size_t
*
outSize
);
void
SZ_compress_args_float_NoCkRngeNoGzip_1D_pwr_pre_log
(
unsigned
char
**
newByteData
,
float
*
oriData
,
double
pwrErrRatio
,
size_t
dataLength
,
size_t
*
outSize
,
float
min
,
float
max
);
void
SZ_compress_args_float_NoCkRngeNoGzip_2D_pwr_pre_log
(
unsigned
char
**
newByteData
,
float
*
oriData
,
double
pwrErrRatio
,
size_t
r1
,
size_t
r2
,
size_t
*
outSize
,
float
min
,
float
max
);
void
SZ_compress_args_float_NoCkRngeNoGzip_3D_pwr_pre_log
(
unsigned
char
**
newByteData
,
float
*
oriData
,
double
pwrErrRatio
,
size_t
r1
,
size_t
r2
,
size_t
r3
,
size_t
*
outSize
,
float
min
,
float
max
);
#ifdef __cplusplus
}
#endif
...
...
thirdparty/SZ/sz/include/szd_double.h
View file @
9ee2ce3c
...
...
@@ -24,6 +24,8 @@ void getSnapshotData_double_1D(double** data, size_t dataSeriesLength, TightData
void
getSnapshotData_double_2D
(
double
**
data
,
size_t
r1
,
size_t
r2
,
TightDataPointStorageD
*
tdps
,
int
errBoundMode
);
void
getSnapshotData_double_3D
(
double
**
data
,
size_t
r1
,
size_t
r2
,
size_t
r3
,
TightDataPointStorageD
*
tdps
,
int
errBoundMode
);
void
getSnapshotData_double_4D
(
double
**
data
,
size_t
r1
,
size_t
r2
,
size_t
r3
,
size_t
r4
,
TightDataPointStorageD
*
tdps
,
int
errBoundMode
);
void
decompressDataSeries_double_2D_nonblocked_with_blocked_regression
(
double
**
data
,
size_t
r1
,
size_t
r2
,
unsigned
char
*
comp_data
);
void
decompressDataSeries_double_3D_nonblocked_with_blocked_regression
(
double
**
data
,
size_t
r1
,
size_t
r2
,
size_t
r3
,
unsigned
char
*
comp_data
);
int
SZ_decompress_args_double
(
double
**
newData
,
size_t
r5
,
size_t
r4
,
size_t
r3
,
size_t
r2
,
size_t
r1
,
unsigned
char
*
cmpBytes
,
size_t
cmpSize
);
...
...
thirdparty/SZ/sz/include/szd_double_pwr.h
View file @
9ee2ce3c
...
...
@@ -21,6 +21,10 @@ double* extractRealPrecision_3D_double(size_t R1, size_t R2, size_t R3, int bloc
void
decompressDataSeries_double_3D_pwr
(
double
**
data
,
size_t
r1
,
size_t
r2
,
size_t
r3
,
TightDataPointStorageD
*
tdps
);
void
decompressDataSeries_double_1D_pwrgroup
(
double
**
data
,
size_t
dataSeriesLength
,
TightDataPointStorageD
*
tdps
);
void
decompressDataSeries_double_1D_pwr_pre_log
(
double
**
data
,
size_t
dataSeriesLength
,
TightDataPointStorageD
*
tdps
);
void
decompressDataSeries_double_2D_pwr_pre_log
(
double
**
data
,
size_t
r1
,
size_t
r2
,
TightDataPointStorageD
*
tdps
);
void
decompressDataSeries_double_3D_pwr_pre_log
(
double
**
data
,
size_t
r1
,
size_t
r2
,
size_t
r3
,
TightDataPointStorageD
*
tdps
);
#ifdef __cplusplus
}
#endif
...
...
thirdparty/SZ/sz/include/szd_float.h
View file @
9ee2ce3c
...
...
@@ -31,6 +31,11 @@ size_t decompressDataSeries_float_2D_RA_block(float * data, float mean, size_t d
int
SZ_decompress_args_float
(
float
**
newData
,
size_t
r5
,
size_t
r4
,
size_t
r3
,
size_t
r2
,
size_t
r1
,
unsigned
char
*
cmpBytes
,
size_t
cmpSize
);
size_t
decompressDataSeries_float_3D_RA_block
(
float
*
data
,
float
mean
,
size_t
dim_0
,
size_t
dim_1
,
size_t
dim_2
,
size_t
block_dim_0
,
size_t
block_dim_1
,
size_t
block_dim_2
,
double
realPrecision
,
int
*
type
,
float
*
unpredictable_data
);
void
decompressDataSeries_float_2D_nonblocked_with_blocked_regression
(
float
**
data
,
size_t
r1
,
size_t
r2
,
unsigned
char
*
comp_data
);
void
decompressDataSeries_float_3D_nonblocked_with_blocked_regression
(
float
**
data
,
size_t
r1
,
size_t
r2
,
size_t
r3
,
unsigned
char
*
comp_data
);
void
decompressDataSeries_float_3D_random_access_with_blocked_regression
(
float
**
data
,
size_t
r1
,
size_t
r2
,
size_t
r3
,
unsigned
char
*
comp_data
);
#ifdef __cplusplus
}
#endif
...
...
thirdparty/SZ/sz/include/szd_float_pwr.h
View file @
9ee2ce3c
...
...
@@ -22,6 +22,9 @@ void decompressDataSeries_float_3D_pwr(float** data, size_t r1, size_t r2, size_
char
*
decompressGroupIDArray
(
unsigned
char
*
bytes
,
size_t
dataLength
);
void
decompressDataSeries_float_1D_pwrgroup
(
float
**
data
,
size_t
dataSeriesLength
,
TightDataPointStorageF
*
tdps
);
void
decompressDataSeries_float_1D_pwr_pre_log
(
float
**
data
,
size_t
dataSeriesLength
,
TightDataPointStorageF
*
tdps
);
void
decompressDataSeries_float_2D_pwr_pre_log
(
float
**
data
,
size_t
r1
,
size_t
r2
,
TightDataPointStorageF
*
tdps
);
void
decompressDataSeries_float_3D_pwr_pre_log
(
float
**
data
,
size_t
r1
,
size_t
r2
,
size_t
r3
,
TightDataPointStorageF
*
tdps
);
#ifdef __cplusplus
}
...
...
thirdparty/SZ/sz/include/utility.h
0 → 100644
View file @
9ee2ce3c
/**
* @file utility.h
* @author Sheng Di, Sihuan Li
* @date July, 2018
* @brief Header file for the utility.c.
* (C) 2016 by Mathematics and Computer Science (MCS), Argonne National Laboratory.
* See COPYRIGHT in top-level directory.
*/
#ifndef _UTILITY_H
#define _UTILITY_H
#include
"sz.h"
#ifdef __cplusplus
extern
"C"
{
#endif
//sihuan added: use a assistant struct to do sorting and swap that are easy to implement: should
//consider optimizing the performance later.
typedef
struct
sort_ast_particle
{
int64_t
id
;
float
var
[
6
];
}
sort_ast_particle
;
int
compare_struct
(
const
void
*
obj1
,
const
void
*
obj2
);
//sihuan added: the compare function in the qsort parameter for 2 structures
void
reorder_vars
(
SZ_VarSet
*
vset
);
//sihuan added: reorder the variables increasingly by their index
size_t
intersectAndsort
(
int64_t
*
preIndex
,
size_t
preLen
,
SZ_VarSet
*
curVar
,
size_t
dataLen
,
unsigned
char
*
bitarray
);
//sihuan added: find intersection and keep new var sorted by id
void
write_reordered_tofile
(
SZ_VarSet
*
curVar
,
size_t
dataLen
);
//sihuan added: write the reordered input to files for further decompression validation
float
calculate_delta_t
(
size_t
size
);
//sihuan added
int
is_lossless_compressed_data
(
unsigned
char
*
compressedBytes
,
size_t
cmpSize
);
unsigned
long
sz_lossless_compress
(
int
losslessCompressor
,
int
level
,
unsigned
char
*
data
,
unsigned
long
dataLength
,
unsigned
char
**
compressBytes
);
unsigned
long
sz_lossless_decompress
(
int
losslessCompressor
,
unsigned
char
*
compressBytes
,
unsigned
long
cmpSize
,
unsigned
char
**
oriData
,
unsigned
long
targetOriSize
);
unsigned
long
sz_lossless_decompress65536bytes
(
int
losslessCompressor
,
unsigned
char
*
compressBytes
,
unsigned
long
cmpSize
,
unsigned
char
**
oriData
);
#ifdef __cplusplus
}
#endif
#endif
/* ----- #ifndef _UTILITY_H ----- */
thirdparty/SZ/sz/src/ByteToolkit.c
View file @
9ee2ce3c
...
...
@@ -430,7 +430,7 @@ long bytesToLong(unsigned char* bytes)
}
//the byte to input is in the big-endian format
float
bytesToFloat
(
unsigned
char
*
bytes
)
inline
float
bytesToFloat
(
unsigned
char
*
bytes
)
{
lfloat
buf
;
memcpy
(
buf
.
byte
,
bytes
,
4
);
...
...
@@ -439,7 +439,7 @@ float bytesToFloat(unsigned char* bytes)
return
buf
.
value
;
}
void
floatToBytes
(
unsigned
char
*
b
,
float
num
)
inline
void
floatToBytes
(
unsigned
char
*
b
,
float
num
)
{
lfloat
buf
;
buf
.
value
=
num
;
...
...
@@ -449,7 +449,7 @@ void floatToBytes(unsigned char *b, float num)
}
//the byte to input is in the big-endian format
double
bytesToDouble
(
unsigned
char
*
bytes
)
inline
double
bytesToDouble
(
unsigned
char
*
bytes
)
{
ldouble
buf
;
memcpy
(
buf
.
byte
,
bytes
,
8
);
...
...
@@ -458,7 +458,7 @@ double bytesToDouble(unsigned char* bytes)
return
buf
.
value
;
}
void
doubleToBytes
(
unsigned
char
*
b
,
double
num
)
inline
void
doubleToBytes
(
unsigned
char
*
b
,
double
num
)
{
ldouble
buf
;
buf
.
value
=
num
;
...
...
@@ -507,7 +507,7 @@ int extractBytes(unsigned char* byteArray, size_t k, int validLength)
return
result
;
}
int
getMaskRightCode
(
int
m
)
{
inline
int
getMaskRightCode
(
int
m
)
{
switch
(
m
)
{
case
1
:
return
0x01
;
...
...
@@ -530,16 +530,16 @@ int getMaskRightCode(int m) {
}
}
int
getLeftMovingCode
(
int
kMod8
)
inline
int
getLeftMovingCode
(
int
kMod8
)
{
return
getMaskRightCode
(
8
-
kMod8
);
}
int
getRightMovingSteps
(
int
kMod8
,
int
resiBitLength
)
{
inline
int
getRightMovingSteps
(
int
kMod8
,
int
resiBitLength
)
{
return
8
-
kMod8
-
resiBitLength
;
}
int
getRightMovingCode
(
int
kMod8
,
int
resiBitLength
)
inline
int
getRightMovingCode
(
int
kMod8
,
int
resiBitLength
)
{
int
rightMovingSteps
=
8
-
kMod8
-
resiBitLength
;
if
(
rightMovingSteps
<
0
)
...
...
@@ -814,7 +814,7 @@ void convertULongArrayToBytes(uint64_t* states, size_t stateLength, unsigned cha
}
size_t
bytesToSize
(
unsigned
char
*
bytes
)
inline
size_t
bytesToSize
(
unsigned
char
*
bytes
)
{
size_t
result
=
0
;
if
(
exe_params
->
SZ_SIZE_TYPE
==
4
)
...
...
@@ -824,7 +824,7 @@ size_t bytesToSize(unsigned char* bytes)
return
result
;
}
void
sizeToBytes
(
unsigned
char
*
outBytes
,
size_t
size
)
inline
void
sizeToBytes
(
unsigned
char
*
outBytes
,
size_t
size
)
{
if
(
exe_params
->
SZ_SIZE_TYPE
==
4
)
intToBytes_bigEndian
(
outBytes
,
size
);
//4
...
...
thirdparty/SZ/sz/src/DynamicDoubleArray.c
View file @
9ee2ce3c
...
...
@@ -21,7 +21,7 @@ void new_DDA(DynamicDoubleArray **dda, size_t cap) {
void
convertDDAtoDoubles
(
DynamicDoubleArray
*
dba
,
double
**
data
)
{
in
t
size
=
dba
->
size
;
size_
t
size
=
dba
->
size
;
if
(
size
>
0
)
*
data
=
(
double
*
)
malloc
(
size
*
sizeof
(
double
));
else
...
...
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