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Francois Tessier
TAPIOCA
Commits
0d88635f
Commit
0d88635f
authored
Jun 27, 2017
by
Francois Tessier
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Bug fix in miniHACC SoA - Add missing TAPIOCA_finalize
parent
ddc1891d
Changes
3
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3 changed files
with
26 additions
and
19 deletions
+26
-19
miniHACC-SoA.cpp
examples/HACC-IO/miniHACC-SoA.cpp
+2
-0
run_check_bgq.sh
examples/HACC-IO/run_check_bgq.sh
+23
-18
run_check_xc40.sh
examples/HACC-IO/run_check_xc40.sh
+1
-1
No files found.
examples/HACC-IO/miniHACC-SoA.cpp
View file @
0d88635f
...
...
@@ -181,6 +181,8 @@ int main (int argc, char * argv[])
MPI_Barrier
(
MPI_COMM_WORLD
);
tp
.
Finalize
();
/*****************/
/* READ */
/*****************/
...
...
examples/HACC-IO/run_check_bgq.sh
View file @
0d88635f
#!/bin/bash
NODES
=
6
4
NODES
=
102
4
PPN
=
16
NPROCS
=
$((
NODES
*
PPN
))
TARGET
=
"/projects/visualization/ftessier/debug"
...
...
@@ -10,7 +10,7 @@ cd $HOME/TAPIOCA/examples/HACC-IO
export
TAPIOCA_DEVNULL
=
false
export
TAPIOCA_COMMSPLIT
=
true
export
TAPIOCA_STRATEGY
=
TOPOLOGY_AWARE
export
TAPIOCA_NBAGGR
=
8
export
TAPIOCA_NBAGGR
=
16
export
TAPIOCA_BUFFERSIZE
=
16777216
export
TAPIOCA_PIPELINING
=
true
...
...
@@ -31,23 +31,28 @@ function updateSettings()
SETTINGS
=
"
$SETTINGS
BGLOCKLESSMPIO_F_TYPE=0x47504653"
}
for
run
in
0
function
outputFile
()
{
OUTPUT
=
"
$HOME
/PUB-IPDPS18/dat/hacc_rw"
OUTPUT
=
"
${
OUTPUT
}
/HACC_BGQ_
${
BIN
}
_
${
NODES
}
_
${
PPN
}
"
OUTPUT
=
"
${
OUTPUT
}
_
${
TAPIOCA_STRATEGY
}
_
${
TAPIOCA_NBAGGR
}
_
${
TAPIOCA_BUFFERSIZE
}
_
${
PARTICLES
}
"
}
updateSettings
for
run
in
{
0..4
}
do
rm
$TARGET
/
*
updateSettings
runjob
--block
$COBALT_PARTNAME
--envs
$SETTINGS
-p
$PPN
--np
$NPROCS
: ./miniHACC-AoS 25000
rm
$TARGET
/
*
updateSettings
runjob
--block
$COBALT_PARTNAME
--envs
$SETTINGS
-p
$PPN
--np
$NPROCS
: ./miniHACC-AoS-MPIIO 25000
rm
$TARGET
/
*
updateSettings
runjob
--block
$COBALT_PARTNAME
--envs
$SETTINGS
-p
$PPN
--np
$NPROCS
: ./miniHACC-SoA 25000
rm
$TARGET
/
*
updateSettings
runjob
--block
$COBALT_PARTNAME
--envs
$SETTINGS
-p
$PPN
--np
$NPROCS
: ./miniHACC-SoA-MPIIO 25000
for
PARTICLES
in
100000
do
for
BIN
in
miniHACC-AoS miniHACC-SoA miniHACC-AoS-MPIIO miniHACC-SoA-MPIIO
do
rm
$TARGET
/
*
outputFile
runjob
--block
$COBALT_PARTNAME
--envs
$SETTINGS
-p
$PPN
--np
$NPROCS
: ./
$BIN
$PARTICLES
>>
$OUTPUT
sleep
5
done
done
done
# #########################
...
...
examples/HACC-IO/run_check_xc40.sh
View file @
0d88635f
...
...
@@ -41,7 +41,7 @@ function updateSettings()
SETTINGS
=
"
$SETTINGS
-e MPICH_RMA_OVER_DMAPP=1"
}
for
PARTICLES
in
5000 15000 25000 35000 50000
for
PARTICLES
in
5000 15000 25000 35000 50000
100000
do
updateSettings
setLustreFS
...
...
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