Script running HACC-IO experiments on Cooley

examples/HACC-IO/run_check_haswell.sh

+#!/bin/bash
+
+NODES=8
+PPN=12
+NPROCS=$((NODES*PPN))
+TARGET="/projects/visualization/ftessier/debug"
+DDT="/soft/debuggers/ddt/bin/ddt --connect"
+
+cd $HOME/install/$ARCHI/bin/
+
+export TAPIOCA_DEVNULL=false
+export TAPIOCA_COMMSPLIT=true
+export TAPIOCA_STRATEGY=TOPOLOGY_AWARE
+export TAPIOCA_NBAGGR=2
+export TAPIOCA_BUFFERSIZE=16777216
+export TAPIOCA_PIPELINING=true
+
+export PAMID_VERBOSE=1
+export AMID_COLLECTIVES_MEMORY_OPTIMIZED=1
+export PAMID_COLLECTIVES=1
+
+function outputFile ()
+{
+    OUTPUT="$HOME/xp_tapioca/memory_abstraction"
+    OUTPUT="${OUTPUT}/HACC_HW_COOLEY_${BIN}_${NODES}_${PPN}"
+    OUTPUT="${OUTPUT}_${TAPIOCA_STRATEGY}_${TAPIOCA_NBAGGR}_${TAPIOCA_BUFFERSIZE}_${PARTICLES}"
+}
+
+printenv | egrep "TAPIOCA_"
+
+rm $TARGET/*
+mpirun -f $COBALT_NODEFILE -n $NPROCS ./miniHACC-AoS 15000
+# ls -l $TARGET/
+# sleep 5
+# mpirun -f $COBALT_NODEFILE -n $NPROCS ./miniHACC-AoS-R 15000
+# sleep 5
+echo
+echo "---------------------------------------------"
+echo
+#mpirun -f $COBALT_NODEFILE -n $NPROCS ./miniHACC-AoS-R 15000
+
+# for run in {0..9}
+# do
+#     for PARTICLES in 5000 15000 25000 35000 50000 100000
+#     do
+#         for BIN in miniHACC-AoS miniHACC-AoS-MPIIO #miniHACC-SoA miniHACC-AoS-MPIIO miniHACC-SoA-MPIIO
+#         do
+# 	    rm $TARGET/*
+# 	    outputFile
+# 	    mpirun -f $COBALT_NODEFILE -n $NPROCS ./$BIN $PARTICLES >> $OUTPUT
+# 	    sleep 3
+# 	done
+#     done
+# done