logutil definitions for hdf5 module

darshan-util/Makefile.in

@@ -56,10 +56,15 @@ darshan-mpiio-logutils.o: darshan-mpiio-logutils.c darshan-logutils.h darshan-mp
 darshan-mpiio-logutils.po: darshan-mpiio-logutils.c darshan-logutils.h darshan-mpiio-logutils.h $(DARSHAN_LOG_FORMAT) $(srcdir)/../darshan-mpiio-log-format.h | uthash-1.9.2
 	$(CC) $(CFLAGS_SHARED) -c  $< -o $@
 
-libdarshan-util.so: darshan-logutils.po darshan-posix-logutils.po darshan-mpiio-logutils.po
+darshan-hdf5-logutils.o: darshan-hdf5-logutils.c darshan-logutils.h darshan-hdf5-logutils.h $(DARSHAN_LOG_FORMAT) $(srcdir)/../darshan-hdf5-log-format.h | uthash-1.9.2
+	$(CC) $(CFLAGS) -c  $< -o $@
+darshan-hdf5-logutils.po: darshan-hdf5-logutils.c darshan-logutils.h darshan-hdf5-logutils.h $(DARSHAN_LOG_FORMAT) $(srcdir)/../darshan-hdf5-log-format.h | uthash-1.9.2
+	$(CC) $(CFLAGS_SHARED) -c  $< -o $@
+
+libdarshan-util.so: darshan-logutils.po darshan-posix-logutils.po darshan-mpiio-logutils.po darshan-hdf5-logutils.po
 	$(CC) $(CFLAGS_SHARED) $(LDFLAGS) -o $@ $^ $(LIBS)
 	
-libdarshan-util.a: darshan-logutils.o darshan-posix-logutils.o darshan-mpiio-logutils.o
+libdarshan-util.a: darshan-logutils.o darshan-posix-logutils.o darshan-mpiio-logutils.o darshan-hdf5-logutils.o
 	ar rcs libdarshan-util.a $^
 
 jenkins: util/bin/jenkins.o lookup3.o

darshan-util/darshan-hdf5-logutils.c

+/*
+ * Copyright (C) 2015 University of Chicago.
+ * See COPYRIGHT notice in top-level directory.
+ *
+ */
+
+#define _GNU_SOURCE
+#include "darshan-util-config.h"
+#include <stdio.h>
+#include <string.h>
+#include <assert.h>
+#include <stdlib.h>
+#include <unistd.h>
+#include <inttypes.h>
+#include <sys/types.h>
+#include <sys/stat.h>
+#include <fcntl.h>
+#include <errno.h>
+
+#include "darshan-hdf5-logutils.h"
+
+/* counter name strings for the HDF5 module */
+#define X(a) #a,
+char *hdf5_counter_names[] = {
+    HDF5_COUNTERS
+};
+
+char *hdf5_f_counter_names[] = {
+    HDF5_F_COUNTERS
+};
+#undef X
+
+struct darshan_mod_logutil_funcs hdf5_logutils =
+{
+    .log_get_record = &darshan_log_get_hdf5_file,
+    .log_print_record = &darshan_log_print_hdf5_file,
+};
+
+int darshan_log_get_hdf5_file(darshan_fd fd, void **file_rec,
+    darshan_record_id *rec_id)
+{
+    int i;
+    int ret;
+    struct darshan_hdf5_file *file = NULL;
+
+    file = malloc(sizeof(*file));
+    if(!file)
+        return(-1);
+    memset(file, 0, sizeof(*file));
+
+    ret = darshan_log_get_moddat(fd, DARSHAN_HDF5_MOD,
+        (void *)file, sizeof(*file));
+    if(ret == 1)
+    {
+        if(fd->swap_flag)
+        {
+            /* swap bytes if necessary */
+            DARSHAN_BSWAP64(&file->f_id);
+            DARSHAN_BSWAP64(&file->rank);
+            for(i=0; i<HDF5_NUM_INDICES; i++)
+                DARSHAN_BSWAP64(&file->counters[i]);
+            for(i=0; i<HDF5_F_NUM_INDICES; i++)
+                DARSHAN_BSWAP64(&file->fcounters[i]);
+        }
+    }
+
+    /* pass the file record back */
+    *file_rec = (void *)file;
+    *rec_id = file->f_id;
+    return(ret);
+}
+
+void darshan_log_print_hdf5_file(void *file_rec, char *file_name,
+    char *mnt_pt, char *fs_type)
+{
+    int i;
+    struct darshan_hdf5_file *hdf5_file_rec =
+        (struct darshan_hdf5_file *)file_rec;
+
+    for(i=0; i<HDF5_NUM_INDICES; i++)
+    {
+        DARSHAN_COUNTER_PRINT(darshan_module_names[DARSHAN_HDF5_MOD],
+            hdf5_file_rec->rank, hdf5_file_rec->f_id, hdf5_counter_names[i],
+            hdf5_file_rec->counters[i], file_name, mnt_pt, fs_type);
+    }
+
+    for(i=0; i<HDF5_F_NUM_INDICES; i++)
+    {
+        DARSHAN_F_COUNTER_PRINT(darshan_module_names[DARSHAN_HDF5_MOD],
+            hdf5_file_rec->rank, hdf5_file_rec->f_id, hdf5_f_counter_names[i],
+            hdf5_file_rec->fcounters[i], file_name, mnt_pt, fs_type);
+    }
+
+    return;
+}
+
+/*
+ * Local variables:
+ *  c-indent-level: 4
+ *  c-basic-offset: 4
+ * End:
+ *
+ * vim: ts=8 sts=4 sw=4 expandtab
+ */

darshan-util/darshan-hdf5-logutils.h

+/*
+ * Copyright (C) 2015 University of Chicago.
+ * See COPYRIGHT notice in top-level directory.
+ *
+ */
+
+#ifndef __DARSHAN_HDF5_LOG_UTILS_H
+#define __DARSHAN_HDF5_LOG_UTILS_H
+
+#include "darshan-logutils.h"
+#include "darshan-hdf5-log-format.h"
+
+extern char *hdf5_counter_names[];
+extern char *hdf5_f_counter_names[];
+
+extern struct darshan_mod_logutil_funcs hdf5_logutils;
+
+int darshan_log_get_hdf5_file(darshan_fd fd, void **file_rec,
+    darshan_record_id *rec_id);
+void darshan_log_print_hdf5_file(void *file_rec, char *file_name,
+    char *mnt_pt, char *fs_type);
+
+#endif

darshan-util/darshan-logutils.c

@@ -29,7 +29,7 @@ struct darshan_mod_logutil_funcs *mod_logutils[DARSHAN_MAX_MODS] =
     NULL,   /* NULL */
     &posix_logutils,    /* POSIX */
     &mpiio_logutils,   /* MPI-IO */
-    NULL,   /* HDF5 */
+    &hdf5_logutils,   /* HDF5 */
     NULL,   /* PNETCDF */
     NULL,
     NULL,

darshan-util/darshan-logutils.h

@@ -55,6 +55,7 @@ extern struct darshan_mod_logutil_funcs *mod_logutils[DARSHAN_MAX_MODS];
 
 #include "darshan-posix-logutils.h"
 #include "darshan-mpiio-logutils.h"
+#include "darshan-hdf5-logutils.h"
 
 darshan_fd darshan_log_open(const char *name, const char* mode);
 int darshan_log_getheader(darshan_fd fd, struct darshan_header *header);