bump repoquality.

pkgs/default.nix

@@ -183,7 +183,9 @@ let
       OPENMC_CROSS_SECTIONS = "${openmc-data}/cross_sections.xml";
       OPENMC_PWD = "${argotk}/share/openmc";
     };
+
     testApplications = test.overrideAttrs (old:{
+      name = "testEnv-with-applications";
       buildInputs = testBuildInputs ++ [
         lammps
         qmcpack
@@ -194,8 +196,9 @@ let
       ];
     });
 
-    expe = test.overrideAttrs (old:{
-      buildInputs = testBuildInputs ++ [
+    expe = testApplications.overrideAttrs (old:{
+      name = "power-experiments";
+      buildInputs = old.buildInputs ++ [
         #debug tools
         pkgs.which
         zmcat
@@ -210,49 +213,44 @@ let
       '';
     });
 
-    analysis =
-    pkgs.rWrapper.override{ packages = with pkgs.rPackages; [
-      pkgs.rlwrap
-      pkgs.pandoc
-      docopt
-      formatR
-      purrr
-      knitr
-      cowplot
-      plotly
-      lubridate
-      dplyr
-      ggplot2
-      xtable
-      ggthemes
-      data_table
-    ];};
-
-    jupyter =
-      let
-        jupyter = import (fetched jupyter/pin.json) {};
-      in
-       (jupyter.jupyterlabWith {
-          kernels = [
-            (jupyter.kernels.juniperWith {
-              name = "analysis";
-              packages = p: with p; [ ggplot2
-                  pkgs.which
-                  docopt
-                  purrr
-                  knitr
-                  cowplot
-                  plotly
-                  lubridate
-                  dplyr
-                  ggplot2
-                  xtable
-                  ggthemes
-                  data_table
-              ];
-            })
-          ];
-         }).env;
+    analysis = pkgs.stdenv.mkDerivation rec {
+      name = "analysis";
+      src = experiments-src;
+
+      #required to be able to build the drv.
+      installPhase = "mkdir $out";
+      unpackPhase = "true";
+
+      buildInputs = [
+        (pkgs.rWrapper.override{ packages = with pkgs.rPackages; [
+          pkgs.rlwrap
+          pkgs.pandoc
+          docopt
+          formatR
+          purrr
+          knitr
+          cowplot
+          plotly
+          lubridate
+          dplyr
+          ggplot2
+          xtable
+          ggthemes
+          data_table
+        ];})
+      ];
+    };
+
+    report = analysis.overrideAttrs (old:{
+      buildPhase = ''
+        echo "analysis/zymakefolder.R ${expe}"
+        analysis/zymakefolder.R ${expe}
+      '';
+      installPhase = ''
+        mkdir -p $out
+        cp -r index* $out
+      '';
+    });
 
     doArgotk = drv: command: drv.overrideAttrs (old:{
       buildPhase = "argotk "+command+" --verbose";
@@ -275,3 +273,33 @@ let
   };
 # re-exporting a full nixpkgs-like package set
 in pkgs // argopkgs
+
+
+
+
+    #jupyter =
+      #let
+        #jupyter = import (fetched jupyter/pin.json) {};
+      #in
+       #(jupyter.jupyterlabWith {
+          #kernels = [
+            #(jupyter.kernels.juniperWith {
+              #name = "analysis";
+              #packages = p: with p; [ ggplot2
+                  #pkgs.which
+                  #docopt
+                  #purrr
+                  #knitr
+                  #cowplot
+                  #plotly
+                  #lubridate
+                  #dplyr
+                  #ggplot2
+                  #xtable
+                  #ggthemes
+                  #data_table
+              #];
+            #})
+          #];
+         #}).env;
+