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argo
argopkgs
Commits
2bc1f8db
Commit
2bc1f8db
authored
Oct 30, 2018
by
Valentin Reis
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renames
parent
e04f3a2f
Changes
12
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12 changed files
with
174 additions
and
73 deletions
+174
-73
pkgs/applications/amg/default.nix
pkgs/applications/amg/default.nix
+0
-0
pkgs/applications/graph500/default.nix
pkgs/applications/graph500/default.nix
+0
-0
pkgs/applications/openmc/default.nix
pkgs/applications/openmc/default.nix
+0
-0
pkgs/applications/qmcpack/TODO.md
pkgs/applications/qmcpack/TODO.md
+0
-0
pkgs/applications/qmcpack/default.nix
pkgs/applications/qmcpack/default.nix
+0
-0
pkgs/applications/simple/default.nix
pkgs/applications/simple/default.nix
+36
-0
pkgs/applications/simple/diffout
pkgs/applications/simple/diffout
+11
-0
pkgs/applications/stream/default.nix
pkgs/applications/stream/default.nix
+0
-0
pkgs/default.nix
pkgs/default.nix
+27
-50
pkgs/intel/icc/default.nix
pkgs/intel/icc/default.nix
+57
-0
pkgs/intel/mkl/default.nix
pkgs/intel/mkl/default.nix
+43
-0
pkgs/simple/default.nix
pkgs/simple/default.nix
+0
-23
No files found.
pkgs/amg/default.nix
→
pkgs/a
pplications/a
mg/default.nix
View file @
2bc1f8db
File moved
pkgs/graph500/default.nix
→
pkgs/
applications/
graph500/default.nix
View file @
2bc1f8db
File moved
pkgs/openmc/default.nix
→
pkgs/
applications/
openmc/default.nix
View file @
2bc1f8db
File moved
pkgs/qmcpack/TODO.md
→
pkgs/
applications/
qmcpack/TODO.md
View file @
2bc1f8db
File moved
pkgs/qmcpack/default.nix
→
pkgs/
applications/
qmcpack/default.nix
View file @
2bc1f8db
File moved
pkgs/applications/simple/default.nix
0 → 100644
View file @
2bc1f8db
{
stdenv
,
fetchgit
,
zeromq
}:
stdenv
.
mkDerivation
{
name
=
"simple"
;
src
=
fetchgit
{
url
=
"https://xgitlab.cels.anl.gov/argo/progress-benchmarks.git"
;
sha256
=
"0wpxb25bfry116rzjb8c66fpxqibrn1dby4xpfsbrnvbhhirck9z"
;
};
buildInputs
=
[
zeromq
];
requiredSystemFeatures
=
[
"icc+mkl"
];
buildPhase
=
''
cd simple
export MKLROOT=/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl
export IPPROOT=/opt/intel/compilers_and_libraries_2017.1.132/linux/ipp
export INTEL_LICENSE_FILE=/opt/intel/compilers_and_libraries_2017.1.132/linux/licenses
export LIBRARY_PATH=/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2017.1.132/linux/ipp/lib/intel64:/opt/intel/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2017.1.132/linux/daal/lib/intel64_lin:$LIBRARY_PATH
export LD_LIBRARY_PATH=/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64:/opt/intel/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2017.1.132/linux/mpi/intel64/lib:/opt/intel/compilers_and_libraries_2017.1.132/linux/ipp/lib/intel64:/opt/intel/debugger_2017/iga/lib:/opt/intel/debugger_2017/libipt/intel64/lib:/opt/intel/compilers_and_libraries_2017.1.132/linux/daal/lib/intel64_lin:$LD_LIBRARY_PATH
export CPATH=/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/include:/opt/intel/compilers_and_libraries_2017.1.132/linux/ipp/include:/opt/intel/compilers_and_libraries_2017.1.132/linux/daal/include
export NLSPATH=/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin/locale/%l_%t/%N:/opt/intel/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64/locale/%l_%t/%N:/opt/intel/debugger_2017/gdb/intel64/share/locale/%l_%t/%N
export PATH=/opt/intel/compilers_and_libraries_2017.1.132/linux/bin/intel64:/opt/intel/compilers_and_libraries_2017.1.132/linux/mpi/intel64/bin:/opt/intel/debugger_2017/gdb/intel64_mic/bin:$PATH
export DAALROOT=/opt/intel/compilers_and_libraries_2017.1.132/linux/daal
export MPM_LAUNCHER=/opt/intel/debugger_2017/mpm/mic/bin/start_mpm.sh
export I_MPI_ROOT=/opt/intel/compilers_and_libraries_2017.1.132/linux/mpi
export CC=icc
make randomwalk
''
;
installPhase
=
''
mkdir -p $out/bin
cp graph500_reference_bfs $out/bin/graph500_reference_bfs
cp graph500_reference_bfs_sssp $out/bin/graph500_reference_bfs_sssp
''
;
}
pkgs/applications/simple/diffout
0 → 100644
View file @
2bc1f8db
MKLROOT=/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl
IPPROOT=/opt/intel/compilers_and_libraries_2017.1.132/linux/ipp
INTEL_LICENSE_FILE=/opt/intel/compilers_and_libraries_2017.1.132/linux/licenses
LIBRARY_PATH=/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2017.1.132/linux/ipp/lib/intel64:/opt/intel/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2017.1.132/linux/daal/lib/intel64_lin
LD_LIBRARY_PATH=/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64:/opt/intel/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2017.1.132/linux/mpi/intel64/lib:/opt/intel/compilers_and_libraries_2017.1.132/linux/ipp/lib/intel64:/opt/intel/debugger_2017/iga/lib:/opt/intel/debugger_2017/libipt/intel64/lib:/opt/intel/compilers_and_libraries_2017.1.132/linux/daal/lib/intel64_lin
CPATH=/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/include:/opt/intel/compilers_and_libraries_2017.1.132/linux/ipp/include:/opt/intel/compilers_and_libraries_2017.1.132/linux/daal/include
NLSPATH=/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin/locale/%l_%t/%N:/opt/intel/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64/locale/%l_%t/%N:/opt/intel/debugger_2017/gdb/intel64/share/locale/%l_%t/%N
PATH=/opt/intel/compilers_and_libraries_2017.1.132/linux/bin/intel64:/opt/intel/compilers_and_libraries_2017.1.132/linux/mpi/intel64/bin:/opt/intel/debugger_2017/gdb/intel64_mic/bin
DAALROOT=/opt/intel/compilers_and_libraries_2017.1.132/linux/daal
MPM_LAUNCHER=/opt/intel/debugger_2017/mpm/mic/bin/start_mpm.sh
I_MPI_ROOT=/opt/intel/compilers_and_libraries_2017.1.132/linux/mpi
pkgs/stream/default.nix
→
pkgs/
applications/
stream/default.nix
View file @
2bc1f8db
File moved
pkgs/default.nix
View file @
2bc1f8db
...
...
@@ -13,6 +13,12 @@
let
callPackage
=
pkgs
.
lib
.
callPackageWith
pkgs
;
pythonPackages
=
pkgs
.
python27Packages
;
utils
=
with
pkgs
.
lib
;
rec
{
makeSearchPath
=
subDir
:
packages
:
concatStringsSep
":"
(
map
(
path
:
path
+
"/"
+
subDir
)
packages
);
makeSearchPathOutput
=
output
:
subDir
:
pkgs
:
makeSearchPath
subDir
(
map
(
pkg
:
"
${
pkg
}
/output"
)
pkgs
);
makeLibraryPath
=
makeSearchPathOutput
"lib"
"lib"
;
};
in
rec
{
libnrm
=
callPackage
./libnrm
{};
nrm-containers
=
callPackage
./containers
{
...
...
@@ -26,56 +32,27 @@ in rec {
applications
=
{
lammps
=
pkgs
.
lammps-mpi
;
amg
=
callPackage
.
/amg
{};
qmcpack
=
callPackage
.
/qmcpack
{};
openmc
=
callPackage
.
/openmc
{};
stream
=
callPackage
.
/stream
{};
graph500
=
callPackage
.
/graph500
{};
simple
=
callPackage
.
/simple
{};
amg
=
callPackage
applications
/amg
{};
qmcpack
=
callPackage
applications
/qmcpack
{};
openmc
=
callPackage
applications
/openmc
{};
stream
=
callPackage
applications
/stream
{};
graph500
=
callPackage
applications
/graph500
{};
simple
=
callPackage
applications
/simple
{};
};
}
# not buildable unless results are present(uses sudo: launch expes in nix-shell)
#appli-enforce = callPackage src/experiments/default.nix
#{ inherit nrm nrm-containers zymake app target;
#application= app;
#samplesize = samplesize-enforce;
#result_type = "enforce";};
## not buildable unless results are present(uses sudo: launch expes in nix-shell)
#appli-bandit = callPackage src/experiments/default.nix
#{ inherit nrm nrm-containers zymake app target;
#application= app;
#samplesize = samplesize-bandit;
#result_type = "bandit";};
#app-analysis-enforce = callPackage src/analysis/default.nix
#{ inherit zymake;
#input-enforce=appli-enforce;
#analysis_type = "enforce";
#target = "dummy";
#};
intel
=
with
pkgs
;
rec
{
inherit
utils
;
compiler_path
=
"/opt/intel/compilers_and_libraries_2017.1.132/linux/bin/intel64/icc"
;
icc
=
callPackage
intel/icc
{
inherit
compiler_path
;
};
mkl
=
callPackage
intel/mkl
{
inherit
compiler_path
;
};
#WrappedICC = if (icc-native != null) then (import ../patches/cc-wrapper {
#inherit stdenv binutils coreutils ;
#libc = glibc;
#nativeTools = false;
#nativeLibc = false;
#cc = icc-native;
#}) else null;
#stdenvICC = (overrideCC stdenv WrappedICC) // { isICC = true; };
};
#app-analysis-bandit = callPackage src/analysis/default.nix
#{ inherit zymake;
#analysis_type = "bandit";
#input-bandit = appli-bandit;
#input-enforce = appli-enforce;
#target = "dummy";
#};
#dev = let
#conf = pkgs.writeText "hound.conf" ''
#{ "max-concurrent-indexers" : 2,
#"dbpath" : "${builtins.toPath ./.}/hound",
#"repos" : {
#"nrm" : { "url" : "file://${builtins.toPath ./nrm}" },
#"containers" : { "url" : "file://${builtins.toPath ./containers}" } } }
#'';
#in pkgs.stdenv.mkDerivation {
##not buildable
#name="nrm-experimental-environment";
#buildInputs = [nrm pkgs.hound];
#shellHook = "${pkgs.hound}/bin/houndd -conf ${conf} &";
#};
#inherit pkgs;
}
pkgs/intel/icc/default.nix
0 → 100644
View file @
2bc1f8db
{
stdenv
,
which
,
compiler_path
}:
let
gcc_path
=
"
${
stdenv
.
cc
}
/bin/gcc"
;
gxx_path
=
"
${
stdenv
.
cc
}
/bin/g++"
;
wrapper
=
stdenv
.
mkDerivation
{
name
=
"intel-compiler-native"
;
unpackPhase
=
'' echo "no sources" ''
;
dontBuild
=
true
;
installPhase
=
''
mkdir -p $out/{bin,include,lib,nix-support};
echo "contruct icc path from
${
compiler_path
}
";
ls
${
compiler_path
}
/bin/intel64/ > /dev/null
pushd
${
compiler_path
}
/bin/intel64/
for i in ./*
do
ln -s
${
compiler_path
}
/bin/intel64/$i $out/bin/$i;
done
popd
ln -s $out/bin/icc $out/bin/cc
ln -s $out/bin/icpc $out/bin/c++
pushd
${
compiler_path
}
/compiler/lib/intel64/
for i in ./*
do
ln -s
${
compiler_path
}
/compiler/lib/intel64/$i $out/lib/$i;
done
popd
ln -s
${
compiler_path
}
/compiler/include $out/include
echo "export NIX_CFLAGS_COMPILE=\"-gcc-name=
${
gcc_path
}
\
''$
{NIX_CFLAGS_COMPILE}\"" >> $out/nix-support/compiler_setup.sh
echo "export NIX_CFLAGS_COMPILE=\"-gxx-name=
${
gcc_path
}
\
''$
{NIX_CFLAGS_COMPILE}\"" >> $out/nix-support/compiler_setup.sh
echo "export NIX_CFLAGS_COMPILE=\"-L$out/lib \
''$
{NIX_CFLAGS_COMPILE}\"" >> $out/nix-support/compiler_setup.sh
''
;
preferLocalBuild
=
true
;
passthru
=
{
isIcc
=
true
;
gcc
=
stdenv
.
cc
;
langFortran
=
true
;
};
};
in
wrapper
pkgs/intel/mkl/default.nix
0 → 100644
View file @
2bc1f8db
{
stdenv
,
compiler_path
,
patchelf
}:
let
wrapper
=
stdenv
.
mkDerivation
{
name
=
"intel-mkl"
;
unpackPhase
=
''echo "no sources"''
;
dontBuild
=
true
;
dontStrip
=
true
;
installPhase
=
''
mkdir -p $out/lib;
pushd
${
compiler_path
}
/mkl/lib/intel64
for i in * ; do
echo "Nixify $i under
${
compiler_path
}
/mkl/lib/intel64"
cp -f -L "
${
compiler_path
}
/mkl/lib/intel64/$i" "$out/lib/$i" || true
${
patchelf
}
/bin/patchelf --set-interpreter
${
stdenv
.
glibc
}
/lib/ld-linux-x86-64.so.2 $out/lib/$i || /bin/true
${
patchelf
}
/bin/patchelf --set-rpath "
${
stdenv
.
cc
.
cc
}
/lib:
${
stdenv
.
glibc
}
/lib:$out/lib" "$out/lib/$i" || /bin/true
done
popd
cp -r
${
compiler_path
}
/mkl/include $out/include
echo "Done"
''
;
preferLocalBuild
=
true
;
passthru
=
{
isMKL
=
true
;
gcc
=
stdenv
.
cc
;
blas
=
{
blas_ldflags
=
"-Wl,--no-as-needed -lmkl_intel_lp64 -lmkl_gnu_thread -lmkl_core -lpthread -lm -ldl"
;
cblas_ldflags
=
"-Wl,--no-as-needed -lmkl_intel_lp64 -lmkl_gnu_thread -lmkl_core -lpthread -lm -ldl"
;
cblas_header
=
"mkl_cblas.h"
;
include_prefix
=
""
;
};
};
};
in
wrapper
pkgs/simple/default.nix
deleted
100644 → 0
View file @
e04f3a2f
{
stdenv
,
fetchgit
,
zeromq
,
useICC
?
false
}:
stdenv
.
mkDerivation
{
name
=
"graph500"
;
src
=
fetchgit
{
url
=
"https://xgitlab.cels.anl.gov/argo/progress-benchmarks.git"
;
sha256
=
"0wpxb25bfry116rzjb8c66fpxqibrn1dby4xpfsbrnvbhhirck9z"
;
};
buildInputs
=
[
zeromq
];
buildPhase
=
''
cd simple
make CC=
${
if
useICC
then
"icc"
else
"gcc"
}
''
;
installPhase
=
''
mkdir -p $out/bin
cp graph500_reference_bfs $out/bin/graph500_reference_bfs
cp graph500_reference_bfs_sssp $out/bin/graph500_reference_bfs_sssp
''
;
}
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