Commit f33e3de3 authored by Huihuo Zheng's avatar Huihuo Zheng
Browse files

modified hdf5 branch dependency to post_open_fix

parent 22767f25
# This is for installing guppy package for memory profiling for Python workloads
git clone git clone
cd guppy3 cd guppy3
python build python build
python install --user python install --user
cd -
...@@ -3,7 +3,7 @@ ...@@ -3,7 +3,7 @@
# #
#module load intelmpi-login-eng #module load intelmpi-login-eng
#export LDFLAGS="-llustreapi -L/opt/cray/pe/pmi/5.0.14/lib64/ -lpmi" #export LDFLAGS="-llustreapi -L/opt/cray/pe/pmi/5.0.14/lib64/ -lpmi"
git clone -b async_vol_register_optional git clone -b post_open_fix
cd hdf5 cd hdf5
./ ./
CC=mpicc CXX=mpicxx CFLAGS='-O3 -DTHETA -Dtopo_timing' ./configure --enable-parallel --enable-symbols=yes --prefix=$HDF5_ROOT/ --enable-build-mode=debug --enable-shared --enable-parallel --enable-threadsafe --enable-unsupported CC=mpicc CXX=mpicxx CFLAGS='-O3 -DTHETA -Dtopo_timing' ./configure --enable-parallel --enable-symbols=yes --prefix=$HDF5_ROOT/ --enable-build-mode=debug --enable-shared --enable-parallel --enable-threadsafe --enable-unsupported
#!/bin/sh #!/bin/sh
export H5PY_PATH=$(ls -d $SDK_DIR/h5py/lib/python*/site-packages/h5py*.egg) export H5PY_PATH=$(ls -d --color=none $SDK_DIR/h5py/lib/python*/site-packages/h5py*.egg)
sed -e "s/MPI4PY_PATH/${MPI4PY_PATH//\//\\/}/g" -e "s/PWD/${PWD//\//\\/}/g" -e "s/H5PY_PATH/${H5PY_PATH//\//\\/}/g" modulefiles/exahdf5.template > modulefiles/exahdf5 sed -e "s/MPI4PY_PATH/${MPI4PY_PATH//\//\\/}/g" -e "s/PWD/${PWD//\//\\/}/g" -e "s/H5PY_PATH/${H5PY_PATH//\//\\/}/g" modulefiles/exahdf5.template > modulefiles/exahdf5
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